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IMP Manual  for IMP version 2.16.0
web_services.md
1 Chimera(X) tools and web services {#web_services}
2 =================================
3 
4 These tools use part of %IMP to tackle some modeling problems.
5 They are the simplest to use because they do not require an %IMP installation.
6 
7 # Chimera(X) tools
8 
9 The [UCSF Chimera](https://www.cgl.ucsf.edu/chimera/) software includes
10 tools that use %IMP:
11 
12  - [Small-Angle X-Ray Profile](https://www.cgl.ucsf.edu/chimera/current/docs/ContributedSoftware/saxs/saxs.html): calculate a theoretical small-angle X-ray scattering (SAXS) profile from a set of atoms
13 
14 In addition, UCSF Chimera is able to read [RMF files](https://integrativemodeling.org/rmf/)
15 generated by %IMP.
16 The newer [UCSF ChimeraX](https://www.rbvi.ucsf.edu/chimerax/) software can
17 also read RMF files using an addon available from the
18 [ChimeraX toolshed](https://cxtoolshed.rbvi.ucsf.edu/apps/chimeraxrmf).
19 
20 # Web services
21 We provide a number of web services that use %IMP:
22 
23  - [AllosMod](https://salilab.org/allosmod/): modeling of ligand-induced
24  protein dynamics and beyond
25  - [FoXS](https://salilab.org/foxs/): fast SAXS profile computation with Debye
26  formula
27  - [AllosMod-FoXS](https://salilab.org/allosmod-foxs/): structure generation
28  and SAXS profile calculations, combining the AllosMod and FoXS servers
29  - [FoXSDock](https://salilab.org/foxsdock/): macromolecular docking with
30  SAXS profile
31  - [SAXS Merge](https://salilab.org/saxsmerge/): an automated statistical
32  method to merge SAXS profiles from different concentrations and
33  exposure times
34  - [Pose & Rank](https://salilab.org/poseandrank/): scoring of protein-ligand
35  complexes